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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015888138.1_cds_XP_016442680.1_37919
CDS Infomation

[gene=LOC107768085] [db_xref=GeneID:107768085] [protein=pentatricopeptide repeat-containing protein At4g36680, mitochondrial-like] [protein_id=XP_016442680.1] [location=join(161946..163139,163802..163837)] [gbkey=CDS]
Sequence

ATGTCTTCTTCCGTCGCCTTGCGCCACGCGCGCCACCTCTCAACCGCCGCTCCTTTGTCA
GCTTTCAGCGCCACCATCTCTATATCCAAAGCAAAATCAAAGCTTAAAGCCGAGCACGAC
CCAGACAAAGCCCTAGAGATTTACTCCTCCGTTTCCGACCGTTACATTTCCCCTTTGTCC
TCCCGTTATGCTCAGGAATACACAGTCAAGCGCCTCGCTAAATCCCATCGTTTTTCCGAC
ATTGAAAGTTTCCTCGACTCTCACAAGAATAGCTCACAAATTACTCAAGAGCCTTTTCTT
TCATCCATAATTCGTTCATATGGAGTCGCCGGAATGTTTGATCACGCGTTTAATATTTAT
CATGAGATGGATGATTTAGGCACCCCCAGATCAGCAATTTCTTTCAATGTGCTTTTAACA
GCTTGCGTGCACTCGAAACAATATGATCGTGTCCCCCAGCTGTTTGATGAAATTCCGGTG
AAGTATGGATTTTTACCTGATAAAGTCTCATATGGTATATTAATTAGGTCATATTGTGAA
AATGGATCGCCAGAAATGGCAATGGAAAGGCTTAAGGAGATGGAAGAGAAAGACGTGGAG
ATTACTACTGTTACTTTCACTACTATATTGCACTCGTTTTATAAGAAGGGGAAGAGCGAT
GAGGCCAAAAGAGTTTGGAATGAGATGGTGATCAGAGGGCGTGGACCGGATGTTGGTGCA
TACAATGTAAAGATTATGAACATTCAGGGTGGTAATCCGGAGGGCGTGAAAGCGTTAATT
GAGGAAATGAGTGATGCAGGGTTAAAACCCGATACGATCAGCTACAATTACTTGATGACT
TGTTATTGTAAGAATGGCTTGATGGATGAGGCGCAGAAGGTTTACGAGGATTTGGAGTCA
AAGGGGTGCAATCCAAACGCTGCAACGTTTAGGACTTTGATCTTTTACTTGTGTAAGAAG
GGACGGTTTGAGACAGGGTATACAGTTTTCAAGGAGAGTGTGAGAGTTCACAAGATTCCG
GATTTCAGTACACTAAAGTATTTGGTGGAAGGGTTGGTGCAGAGATCAAAGTTGAAAGAT
GCAAAAGGGATGAGCAGGACAGTGAAGAAGAAGTTCCCTCCTAACTTGGTAAAAGCTTGG
ACCAAGCTAGAGGAGGAGCTTGGTCTGGCTAAACTAGAAGCCGGTGATAAGAAGAAAAAG
GATGCCCGATGGCGAATTCCTTTCATATAA

Peptide Sequence

PEP ID

XP_016442680.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At4g36680, mitochondrial-like [Nicotiana tabacum]
Sequence

MSSSVALRHARHLSTAAPLSAFSATISISKAKSKLKAEHDPDKALEIYSSVSDRYISPLS
SRYAQEYTVKRLAKSHRFSDIESFLDSHKNSSQITQEPFLSSIIRSYGVAGMFDHAFNIY
HEMDDLGTPRSAISFNVLLTACVHSKQYDRVPQLFDEIPVKYGFLPDKVSYGILIRSYCE
NGSPEMAMERLKEMEEKDVEITTVTFTTILHSFYKKGKSDEAKRVWNEMVIRGRGPDVGA
YNVKIMNIQGGNPEGVKALIEEMSDAGLKPDTISYNYLMTCYCKNGLMDEAQKVYEDLES
KGCNPNAATFRTLIFYLCKKGRFETGYTVFKESVRVHKIPDFSTLKYLVEGLVQRSKLKD
AKGMSRTVKKKFPPNLVKAWTKLEEELGLAKLEAGDKKKKDARWRIPFI

Transcript Sequence

Gene sequence data has not been registered.